<rss version="2.0" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Hacker News: rbartelme</title><link>https://news.ycombinator.com/user?id=rbartelme</link><description>Hacker News RSS</description><docs>https://hnrss.org/</docs><generator>hnrss v2.1.1</generator><lastBuildDate>Thu, 09 Apr 2026 15:36:02 +0000</lastBuildDate><atom:link href="https://hnrss.org/user?id=rbartelme" rel="self" type="application/rss+xml"></atom:link><item><title><![CDATA[New comment by rbartelme in "DOGE Bro's Grant Review Process Was Literally Just Asking ChatGPT 'Is This DEI?'"]]></title><description><![CDATA[
<p>I wonder if the same thing happened with--or is happening at--NSF? I know researchers that did not get funding for quantitative ecology fellowships or grants. After back channeling with program managers, it seems that using "diversity"--as in the quantitative ecological measures, metrics, or derived functional values--may have flagged proposals to be rejected.<p><a href="https://en.wikipedia.org/wiki/Alpha_diversity" rel="nofollow">https://en.wikipedia.org/wiki/Alpha_diversity</a>
<a href="https://en.wikipedia.org/wiki/Beta_diversity" rel="nofollow">https://en.wikipedia.org/wiki/Beta_diversity</a>
<a href="https://en.wikipedia.org/wiki/Gamma_diversity" rel="nofollow">https://en.wikipedia.org/wiki/Gamma_diversity</a>
<a href="https://en.wikipedia.org/wiki/Zeta_diversity" rel="nofollow">https://en.wikipedia.org/wiki/Zeta_diversity</a></p>
]]></description><pubDate>Thu, 19 Feb 2026 20:33:24 +0000</pubDate><link>https://news.ycombinator.com/item?id=47078850</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=47078850</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=47078850</guid></item><item><title><![CDATA[New comment by rbartelme in "Optimizing sparse and skew hashing: faster k-mer dictionaries"]]></title><description><![CDATA[
<p>Pretty cool bioinformatics algorithm to speed up what was traditionally a dynamic Burrows-Wheeler Transform. Interested to see where this gets implemented outside of benchmarking in the next few years!</p>
]]></description><pubDate>Tue, 27 Jan 2026 17:32:28 +0000</pubDate><link>https://news.ycombinator.com/item?id=46783261</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=46783261</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=46783261</guid></item><item><title><![CDATA[Optimizing sparse and skew hashing: faster k-mer dictionaries]]></title><description><![CDATA[
<p>Article URL: <a href="https://www.biorxiv.org/content/10.64898/2026.01.21.700884v1">https://www.biorxiv.org/content/10.64898/2026.01.21.700884v1</a></p>
<p>Comments URL: <a href="https://news.ycombinator.com/item?id=46783260">https://news.ycombinator.com/item?id=46783260</a></p>
<p>Points: 3</p>
<p># Comments: 1</p>
]]></description><pubDate>Tue, 27 Jan 2026 17:32:28 +0000</pubDate><link>https://www.biorxiv.org/content/10.64898/2026.01.21.700884v1</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=46783260</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=46783260</guid></item><item><title><![CDATA[New comment by rbartelme in "The price of fame? Mortality risk among famous singers"]]></title><description><![CDATA[
<p>Thanks for the perspective. This makes me think I was a bit quick to judge their methodologies.</p>
]]></description><pubDate>Thu, 08 Jan 2026 19:59:27 +0000</pubDate><link>https://news.ycombinator.com/item?id=46545679</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=46545679</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=46545679</guid></item><item><title><![CDATA[New comment by rbartelme in "The price of fame? Mortality risk among famous singers"]]></title><description><![CDATA[
<p>It's somewhat interesting, but the authors' conclusions are a bit odd given their data.<p>They acknowledge that fame is potentially confounding:
Risk factors (impulsivity, substance use, etc.) -> Fame achievement |
Risk factors -> Early mortality<p>The authors also appear to conclude that fame is semi-causal of the mortality risk. If, taking a causal statistical approach, the authors conditioned on the collider:<p>Risk factors (substance use, personality traits, mental health vulnerabilities) -> Becoming/staying a professional singer <- Talent/drive toward fame<p>I do applaud them for preregistering the study, but I think this paper needed a little more rigor in peer review.</p>
]]></description><pubDate>Thu, 08 Jan 2026 16:31:34 +0000</pubDate><link>https://news.ycombinator.com/item?id=46542984</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=46542984</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=46542984</guid></item><item><title><![CDATA[New comment by rbartelme in "MinIO is now in maintenance-mode"]]></title><description><![CDATA[
<p>Might be coming soon based on this: <a href="https://docs.rustfs.com/features/replication/" rel="nofollow">https://docs.rustfs.com/features/replication/</a></p>
]]></description><pubDate>Wed, 03 Dec 2025 17:27:41 +0000</pubDate><link>https://news.ycombinator.com/item?id=46137294</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=46137294</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=46137294</guid></item><item><title><![CDATA[New comment by rbartelme in "Python Data Science Handbook"]]></title><description><![CDATA[
<p>Outside bioconductor or the tidyverse in R can be just as unstable due to CRAN's package requirements.</p>
]]></description><pubDate>Tue, 02 Dec 2025 17:17:07 +0000</pubDate><link>https://news.ycombinator.com/item?id=46123633</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=46123633</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=46123633</guid></item><item><title><![CDATA[New comment by rbartelme in "Python Data Science Handbook"]]></title><description><![CDATA[
<p>This is a non-issue with Polars dataframes to_pandas() method. You get all the performance of Polars for cleaning large datasets, and to_pandas() gives you backwards compatibility with other libraries. However, plotnine is completely compatible with Polars dataframe objects.</p>
]]></description><pubDate>Tue, 02 Dec 2025 17:14:30 +0000</pubDate><link>https://news.ycombinator.com/item?id=46123590</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=46123590</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=46123590</guid></item><item><title><![CDATA[New comment by rbartelme in "A cell so minimal that it challenges definitions of life"]]></title><description><![CDATA[
<p>> Life's two most fundamental properties are homeostasis and reproduction.
> The loss of these two combined with its parasitic nature makes this cell a form on non-life.<p>This is a decidedly Eukaryote-centric take. Homeostasis in higher mammals is a complex network of genes -> RNA -> proteins -> metabolic pathways<p>Reproduction is also far more simple in organisms with binary fission cellular division.<p>A more appropriate scientific term would be obligate commensalism vs. "parasitic". That actually encapsulates their need for metabolic precursors from the host, but allows for tRNA, rRNA, origin of replication, etc...present in the organism's genome.</p>
]]></description><pubDate>Wed, 26 Nov 2025 22:59:58 +0000</pubDate><link>https://news.ycombinator.com/item?id=46063289</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=46063289</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=46063289</guid></item><item><title><![CDATA[New comment by rbartelme in "A cell so minimal that it challenges definitions of life"]]></title><description><![CDATA[
<p>For all the folks saying, "Isn't this just a virus?"<p>The actual paper states that the genome encodes transfer RNA's and ribosomal RNA's. I think that's a really important biological distinction missing from the popular press junket. The primary source material is well written and elucidates a lot more than the Quanta article. <a href="https://www.biorxiv.org/content/10.1101/2025.05.02.651781v1" rel="nofollow">https://www.biorxiv.org/content/10.1101/2025.05.02.651781v1</a></p>
]]></description><pubDate>Wed, 26 Nov 2025 20:14:51 +0000</pubDate><link>https://news.ycombinator.com/item?id=46061842</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=46061842</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=46061842</guid></item><item><title><![CDATA[New comment by rbartelme in "Widespread distribution of bacteria containing PETases across global oceans"]]></title><description><![CDATA[
<p>If you're interested in this topic, I'd highly recommend checking out Michigan State's E coli Long-term  Evolution Experiment: <a href="https://lenski.mmg.msu.edu/ecoli/index.html" rel="nofollow">https://lenski.mmg.msu.edu/ecoli/index.html</a></p>
]]></description><pubDate>Tue, 11 Nov 2025 18:19:37 +0000</pubDate><link>https://news.ycombinator.com/item?id=45890872</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=45890872</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=45890872</guid></item><item><title><![CDATA[New comment by rbartelme in "'Attention is all you need' coauthor says he's 'sick' of transformers"]]></title><description><![CDATA[
<p>Yeah I think this is definitely the future. Recently, I too have spent considerable time on probabilistic hyper-graph models in certain domains of science. Maybe it _is_ the next big thing.</p>
]]></description><pubDate>Fri, 24 Oct 2025 17:46:48 +0000</pubDate><link>https://news.ycombinator.com/item?id=45697171</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=45697171</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=45697171</guid></item><item><title><![CDATA[New comment by rbartelme in "I managed to grow countable yeast colonies"]]></title><description><![CDATA[
<p>Sometimes I miss the benchwork, but moving into bioinformatics/data science full-time has been much better for my physical and mental health.</p>
]]></description><pubDate>Fri, 24 Oct 2025 16:37:56 +0000</pubDate><link>https://news.ycombinator.com/item?id=45696326</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=45696326</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=45696326</guid></item><item><title><![CDATA[New comment by rbartelme in "I managed to grow countable yeast colonies"]]></title><description><![CDATA[
<p>Countable is a relative term in microbiology. I like that the author stuck to the phrase "countable colonies", since colony forming units are not really "countable as cells".<p>Allan Konopka does a good deep dive into "The Great Plate Count Anomaly" here: <a href="https://thinkmicrobe.substack.com/p/the-great-plate-count-anomaly" rel="nofollow">https://thinkmicrobe.substack.com/p/the-great-plate-count-an...</a></p>
]]></description><pubDate>Thu, 23 Oct 2025 22:09:38 +0000</pubDate><link>https://news.ycombinator.com/item?id=45687980</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=45687980</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=45687980</guid></item><item><title><![CDATA[New comment by rbartelme in "MemMachine"]]></title><description><![CDATA[
<p>> Meet MemMachine, an open-source memory layer for advanced AI agents. It enables AI-powered applications to learn, store, and recall data and preferences from past sessions to enrich future interactions. MemMachine's memory layer persists across multiple sessions, agents, and large language models, building a sophisticated, evolving user profile. It transforms AI chatbots into personalized, context-aware AI assistants designed to understand and respond with better precision and depth.<p>This seems really interesting for local LLM experimentation.</p>
]]></description><pubDate>Thu, 23 Oct 2025 22:02:59 +0000</pubDate><link>https://news.ycombinator.com/item?id=45687896</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=45687896</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=45687896</guid></item><item><title><![CDATA[MemMachine]]></title><description><![CDATA[
<p>Article URL: <a href="https://memmachine.ai">https://memmachine.ai</a></p>
<p>Comments URL: <a href="https://news.ycombinator.com/item?id=45687895">https://news.ycombinator.com/item?id=45687895</a></p>
<p>Points: 2</p>
<p># Comments: 1</p>
]]></description><pubDate>Thu, 23 Oct 2025 22:02:59 +0000</pubDate><link>https://memmachine.ai</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=45687895</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=45687895</guid></item><item><title><![CDATA[New comment by rbartelme in "RFK Jr. Must Go"]]></title><description><![CDATA[
<p>>The replication crisis is a growing concern.<p>This! The amount of clinicians I know who simply read the abstract of a case study, with no real statistical interpretation of results, is a non-zero number.<p>Whenever I see some hyped up popular press article about a scientific study, my immediate reaction is to go to the primary literature. First, I read the study design and analysis methods, then I determine if its even worth continuing to read the rest. Study pre-registration should be a must and papers need to be more explicit about being exploratory when the sample size dictates it.</p>
]]></description><pubDate>Tue, 14 Oct 2025 17:05:03 +0000</pubDate><link>https://news.ycombinator.com/item?id=45582398</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=45582398</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=45582398</guid></item><item><title><![CDATA[New comment by rbartelme in "R MCP Server"]]></title><description><![CDATA[
<p>I agree with all of this. I've worked in optical engineering, bioinformatics, and data science writ large for over a decade, knowing the data collection process is foundational to statistical process control and statistical design of experiments. I've watched former employers light cash on fire chasing results from similar methods this MCP runs on the backend due to lack of measurement/experimental context.</p>
]]></description><pubDate>Fri, 19 Sep 2025 22:11:57 +0000</pubDate><link>https://news.ycombinator.com/item?id=45307337</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=45307337</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=45307337</guid></item><item><title><![CDATA[New comment by rbartelme in "R MCP Server"]]></title><description><![CDATA[
<p>This MCP agent still doesn't defend the statistically illiterate from themselves.</p>
]]></description><pubDate>Fri, 19 Sep 2025 22:06:33 +0000</pubDate><link>https://news.ycombinator.com/item?id=45307286</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=45307286</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=45307286</guid></item><item><title><![CDATA[New comment by rbartelme in "Did an NYU professor get fired because students hate organic chem?"]]></title><description><![CDATA[
<p>This professor was, quite literally, on a teaching only contract.</p>
]]></description><pubDate>Thu, 06 Oct 2022 14:45:32 +0000</pubDate><link>https://news.ycombinator.com/item?id=33108868</link><dc:creator>rbartelme</dc:creator><comments>https://news.ycombinator.com/item?id=33108868</comments><guid isPermaLink="false">https://news.ycombinator.com/item?id=33108868</guid></item></channel></rss>